Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792013.1_cds_XP_016509912.1_2197
CDS Infomation

[gene=LOC107827322] [db_xref=GeneID:107827322] [protein=serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like isoform X2] [protein_id=XP_016509912.1] [location=join(4837..5997,7255..7584,8037..8048)] [gbkey=CDS]
Sequence

ATGCTTAAGCAAATCCTTGCAAAACTTCCTAGAAAATCATCGAAATGTGATTCGTTTGAT
ACATCAGGAAGCAATTCCTGCAACAACACCACGAACTCGGGAAATGGAATTCCGTTTACC
AATAGTTGCACTGTCATAGCAACAAGGCTGAATGTAGTGAAACGGATGTCGACAGCGATT
TTTCCTACAAGTATTGTTGCTGGTAATGAGTCTGTGGCACCACACGTTCCCTTTAAAGAT
GTTTCAAATGGGGAGAAACAAAGCTTATTCATAAGCAAGTTGAATCTCTGCTGTTCTATT
TACGATTTCAATGATCCTGATAAGGATTTGACGGAGAAGGACTTGAAACGACAAGTTTTG
CTTGAGCTGAATGATTTTGTCGCTTCAGGATCCGCAAGATTTACAGAATCAGCAATCGCT
GCGGTCTGTAAAATGTGTGCAGTTAACCTGTTCAGAACGTTTCCTCCTAAGTCATATCTC
TCAGCTCGCAGTGAAAGTGAAGATGAAGAACCGATGTTTGATCCAGCTTGGTGTCATTTA
CAACTTGTGTATGACTTATTCCTTAGCGTCATTAGTCAAAGCTCTCTTGACGCAAAAGTT
GCTAAGAAACACGTAGACCATTCTTTCATTTTGAAATTGCTTAACCTATTTGATTCTGAG
GACCCAAGAGAAAGAGAATGCTTGAAGTCGATATTGCATCGTCTTTACGGGAAGTTTATG
ATGCACAGGCCTTCTATCAGAAAGGCTGTAAGCAATATTTTTTATCGTTTTGCTTTCGAG
ACCGAAAGGCATAATGGGATTGCCGAGCTTCTAGAGGTTTTTGGAAGTGTAATTAGTGGA
TTTGCTTTACCATTAAAGGAAGAGCACAGATCGTTTTTCTCCAGGGCGTTGATACCTCTG
CACAAGCCGAAATCTTTGGGTGTCTATCATCAACAGTTAGCATATTGTGTCGTACAGTTC
ATAGAAAAGGAACAAAATCTTGCTAGCGTAGCGATAACGAGATTGTTGAGGTATTGGCCG
GTGACAAGTAGCCAGAAACAGTTGATGTTCATCAGTGAGTTGGAAGAGCTTTTGGAAATG
ATCAGTGTTGCAGAATTTGAGAAGATCATGGTGCCGTTGTTTCGTCGTATAGGTTATTGC
CTTAACAGCTCCCATTTCCAGGTGGCCGAAAGAGCACATTTCTTGTGGAACAACGATAAC
GTCCTTAACCTCGTGATGCATAACAGGCATGTCATCATGCCAATTATTGTCTCAGCTTTA
GAACGTAACAGCCAAAACCACTGGAATAAAGCAGTTCTTAATCTGACACAAAATGTGAGG
AAAGTCTTTTCCGAGATGGATGAAGAACTTGTACTCCACTGCCAAAGCAAACTCGAAGAA
GAAAATTCAAAGTCAAATGTAGCAGCCGAGAGACGAAGGTTGACATGGGAGCGCCTAGAA
ATCGCTGCTAACTATCAACCTGTTACCATGCCTTCTAATATTTCCGGCCTGATTGGATTT
TAG

Peptide Sequence

PEP ID

XP_016509912.1
PEP Infomation

PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like isoform X2 [Nicotiana tabacum]
Sequence

MLKQILAKLPRKSSKCDSFDTSGSNSCNNTTNSGNGIPFTNSCTVIATRLNVVKRMSTAI
FPTSIVAGNESVAPHVPFKDVSNGEKQSLFISKLNLCCSIYDFNDPDKDLTEKDLKRQVL
LELNDFVASGSARFTESAIAAVCKMCAVNLFRTFPPKSYLSARSESEDEEPMFDPAWCHL
QLVYDLFLSVISQSSLDAKVAKKHVDHSFILKLLNLFDSEDPRERECLKSILHRLYGKFM
MHRPSIRKAVSNIFYRFAFETERHNGIAELLEVFGSVISGFALPLKEEHRSFFSRALIPL
HKPKSLGVYHQQLAYCVVQFIEKEQNLASVAITRLLRYWPVTSSQKQLMFISELEELLEM
ISVAEFEKIMVPLFRRIGYCLNSSHFQVAERAHFLWNNDNVLNLVMHNRHVIMPIIVSAL
ERNSQNHWNKAVLNLTQNVRKVFSEMDEELVLHCQSKLEEENSKSNVAAERRRLTWERLE
IAANYQPVTMPSNISGLIGF

Transcript Sequence

Gene sequence data has not been registered.